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DERA deoxyribose-phosphate aldolase [ Acinonyx jubatus (cheetah) ]

Gene ID: 106965678, updated on 13-Mar-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
Gene type
protein coding
RefSeq status
MODEL
Organism
Acinonyx jubatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Acinonychinae; Acinonyx
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: B4
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_04 current VMU_Ajub_asm_v1.0 (GCF_027475565.1) B4 NC_069387.1 (48474835..48592637)

Chromosome B4 - NC_069387.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113593097 Neighboring gene uncharacterized LOC113593103 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene uncharacterized LOC128316360 Neighboring gene solute carrier family 15 member 5 Neighboring gene uncharacterized LOC113592983

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_069387.1 Chromosome B4 Reference VMU_Ajub_asm_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027475565.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VMU_Ajub_asm_v1.0

Genomic

  1. NC_069387.1 Reference VMU_Ajub_asm_v1.0

    Range
    48474835..48592637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027035634.2 → XP_026891435.1  deoxyribose-phosphate aldolase isoform X1

    UniProtKB/TrEMBL
    A0A6J1XG22
    Conserved Domains (1) summary
    cd00959
    Location:50 → 277
    DeoC; 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family

  2. XM_053225874.1 → XP_053081849.1  deoxyribose-phosphate aldolase isoform X3

  3. XM_053225873.1 → XP_053081848.1  deoxyribose-phosphate aldolase isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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