U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:dkey-13a21.4 uncharacterized LOC106964934 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106964934, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
si:dkey-13a21.4
Gene description
uncharacterized LOC106964934
See related
Ensembl:ENSPLAG00000019688
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See si:dkey-13a21.4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015114353.1 (51003..53720, complement)

NW_015114353.1Genomic Context describing neighboring genes Neighboring gene opsin 1 (cone pigments), short-wave-sensitive 2 Neighboring gene host cell factor C1a Neighboring gene uncharacterized LOC106964936 Neighboring gene GATA binding protein 1a Neighboring gene BCL2 like 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015114353.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosome to lysosome transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phagosome-lysosome fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagocytic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ras-related protein Rab-7a-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015114353.1 Reference P_latipinna-1.0

    Range
    51003..53720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015060725.1 → XP_014916211.1  ras-related protein Rab-7a-like

    UniProtKB/TrEMBL
    A0A3B3VX57
    Related
    ENSPLAP00000029457.1, ENSPLAT00000030776.1
    Conserved Domains (2) summary
    smart00175
    Location:10 → 176
    RAB; Rab subfamily of small GTPases
    cl21455
    Location:10 → 178
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases