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LOC106962569 C-terminal-binding protein 1-like [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106962569, updated on 2-Nov-2023

Summary

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Gene symbol
LOC106962569
Gene description
C-terminal-binding protein 1-like
See related
Ensembl:ENSPLAG00000009382
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC106962569 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015114048.1 (64138..84198)

NW_015114048.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein A/B Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase Neighboring gene protein FAM53C-like Neighboring gene spondin 2a, extracellular matrix protein Neighboring gene lysine (K)-specific demethylase 3B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015114048.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015114048.1 Reference P_latipinna-1.0

    Range
    64138..84198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015057047.1 → XP_014912533.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A3B3VG19
    Related
    ENSPLAP00000023759.1, ENSPLAT00000005161.1
    Conserved Domains (2) summary
    COG0111
    Location:62 → 363
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_015057046.1 → XP_014912532.1  C-terminal-binding protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A3B3VG19
    Related
    ENSPLAP00000007068.1, ENSPLAT00000005191.1
    Conserved Domains (2) summary
    COG0111
    Location:62 → 363
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:35 → 353
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_015057048.1 → XP_014912534.1  C-terminal-binding protein 1-like isoform X2

    Conserved Domains (2) summary
    COG0111
    Location:44 → 345
    SerA; Phosphoglycerate dehydrogenase or related dehydrogenase [Coenzyme transport and metabolism, General function prediction only]
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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