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gtpbp1 GTP binding protein 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106957470, updated on 13-Mar-2024

Summary

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Gene symbol
gtpbp1
Gene description
GTP binding protein 1
See related
Ensembl:ENSPLAG00000017284
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See gtpbp1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113522.1 (80360..87542, complement)

NW_015113522.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 29-like Neighboring gene small G protein signaling modulator 3 Neighboring gene lectin, galactoside-binding, soluble, 2a Neighboring gene voltage-dependent T-type calcium channel subunit alpha-1I-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113522.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP-binding protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113522.1 Reference P_latipinna-1.0

    Range
    80360..87542 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015048840.1 → XP_014904326.1  GTP-binding protein 1-like isoform X1

    Conserved Domains (4) summary
    cd04165
    Location:163 → 418
    GTPBP1_like; GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
    COG5258
    Location:77 → 606
    GTPBP1; GTPase [General function prediction only]
    cd03694
    Location:427 → 513
    GTPBP_II; Domain II of the GTPBP family of GTP binding proteins
    cd03708
    Location:519 → 605
    GTPBP_III; Domain III of the GP-1 family of GTPases

  2. XM_015048842.1 → XP_014904328.1  GTP-binding protein 1-like isoform X3

    UniProtKB/TrEMBL
    A0A3B3VSX7
    Related
    ENSPLAP00000028131.1, ENSPLAT00000021813.1
    Conserved Domains (4) summary
    cd04165
    Location:163 → 387
    GTPBP1_like; GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
    COG5258
    Location:77 → 575
    GTPBP1; GTPase [General function prediction only]
    cd03694
    Location:396 → 482
    GTPBP_II; Domain II of the GTPBP family of GTP binding proteins
    cd03708
    Location:488 → 574
    GTPBP_III; Domain III of the GP-1 family of GTPases

  3. XM_015048841.1 → XP_014904327.1  GTP-binding protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0A3B3VSX7
    Conserved Domains (4) summary
    cd04165
    Location:163 → 387
    GTPBP1_like; GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
    COG5258
    Location:77 → 575
    GTPBP1; GTPase [General function prediction only]
    cd03694
    Location:396 → 482
    GTPBP_II; Domain II of the GTPBP family of GTP binding proteins
    cd03708
    Location:488 → 574
    GTPBP_III; Domain III of the GP-1 family of GTPases
Nucleotide Protein
Heading Accession and Version

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