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septin5a septin 5a [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106956796, updated on 13-Mar-2024

Summary

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Gene symbol
septin5a
Gene description
septin 5a
See related
Ensembl:ENSPLAG00000018547
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
sept5; sept5a; septin5
Orthologs
human zebrafish all
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Genomic context

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See septin5a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113461.1 (105617..128328)

NW_015113461.1Genomic Context describing neighboring genes Neighboring gene claudin 5a Neighboring gene uncharacterized LOC106956797 Neighboring gene uncharacterized LOC106956799 Neighboring gene glycoprotein Ib platelet subunit beta Neighboring gene DEAH (Asp-Glu-Ala-His) box polypeptide 37

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113461.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables molecular adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoskeleton-dependent cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell division site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of septin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in septin ring IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
septin-5
Names
septin 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113461.1 Reference P_latipinna-1.0

    Range
    105617..128328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015047850.1 → XP_014903336.1  septin-5 isoform X3

    UniProtKB/TrEMBL
    A0A3B3VTS3
    Conserved Domains (2) summary
    COG5019
    Location:23 → 383
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00735
    Location:41 → 314
    Septin; Septin

  2. XM_015047848.1 → XP_014903334.1  septin-5 isoform X1

    UniProtKB/TrEMBL
    A0A3B3VTS3
    Conserved Domains (2) summary
    COG5019
    Location:28 → 388
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00735
    Location:46 → 319
    Septin; Septin

  3. XM_015047849.1 → XP_014903335.1  septin-5 isoform X2

    UniProtKB/TrEMBL
    A0A3B3UKW2, A0A3B3VTS3
    Related
    ENSPLAP00000014005.1, ENSPLAT00000022167.1
    Conserved Domains (2) summary
    COG5019
    Location:28 → 374
    CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    pfam00735
    Location:46 → 319
    Septin; Septin
Nucleotide Protein
Heading Accession and Version

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