U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

cracr2b calcium release activated channel regulator 2B [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106955821, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
cracr2b
Gene description
calcium release activated channel regulator 2B
See related
Ensembl:ENSPLAG00000003773
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See cracr2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113386.1 (108665..119271, complement)

NW_015113386.1Genomic Context describing neighboring genes Neighboring gene glutamine amidotransferase class 1 domain containing 1 Neighboring gene CD151 molecule Neighboring gene transmembrane protein 138 Neighboring gene transmembrane protein 258

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_015113386.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
EF-hand calcium-binding domain-containing protein 4A

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113386.1 Reference P_latipinna-1.0

    Range
    108665..119271 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015046225.1 → XP_014901711.1  EF-hand calcium-binding domain-containing protein 4A isoform X1

    Conserved Domains (5) summary
    smart00175
    Location:467 → 627
    RAB; Rab subfamily of small GTPases
    cd00154
    Location:467 → 627
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    cd00051
    Location:63 → 122
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:64 → 120
    EF-hand_7; EF-hand domain pair
    pfam16008
    Location:255 → 360
    DUF4778; Domain of unknown function (DUF4778)

  2. XM_015046226.1 → XP_014901712.1  EF-hand calcium-binding domain-containing protein 4A isoform X2

    UniProtKB/TrEMBL
    A0A3B3V712
    Related
    ENSPLAP00000020679.1, ENSPLAT00000012934.1
    Conserved Domains (5) summary
    smart00175
    Location:465 → 625
    RAB; Rab subfamily of small GTPases
    cd00154
    Location:465 → 625
    Rab; Ras-related in brain (Rab) family of small guanosine triphosphatases (GTPases)
    cd00051
    Location:63 → 122
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    pfam13499
    Location:64 → 120
    EF-hand_7; EF-hand domain pair
    pfam16008
    Location:253 → 358
    DUF4778; Domain of unknown function (DUF4778)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.