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arl5c ADP-ribosylation factor-like 5C [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106953282, updated on 13-Mar-2024

Summary

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Gene symbol
arl5c
Gene description
ADP-ribosylation factor-like 5C
See related
Ensembl:ENSPLAG00000002394
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See arl5c in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113189.1 (73082..75487)

NW_015113189.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106953279 Neighboring gene calcium channel, voltage-dependent, beta 1 subunit Neighboring gene uncharacterized LOC106953283 Neighboring gene plexin domain-containing protein 1-like Neighboring gene LIM and SH3 protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113189.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 5B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113189.1 Reference P_latipinna-1.0

    Range
    73082..75487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015041912.1 → XP_014897398.1  ADP-ribosylation factor-like protein 5B

    UniProtKB/TrEMBL
    A0A3B3TL58, A0A3B3TM30
    Related
    ENSPLAP00000001362.1, ENSPLAT00000014875.1
    Conserved Domains (1) summary
    cd04153
    Location:4 → 175
    Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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