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rab25b RAB25, member RAS oncogene family b [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106951778, updated on 13-Mar-2024

Summary

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Gene symbol
rab25b
Gene description
RAB25, member RAS oncogene family b
See related
Ensembl:ENSPLAG00000008004
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Also known as
rab25
Orthologs
human zebrafish all
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Genomic context

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See rab25b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113089.1 (274793..288559)

NW_015113089.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106951759 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 Neighboring gene uncharacterized LOC106951780 Neighboring gene RAB11a, member RAS oncogene family, like Neighboring gene mex-3 RNA binding family member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113089.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ras-related protein Rab-25

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113089.1 Reference P_latipinna-1.0

    Range
    274793..288559
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015039478.1 → XP_014894964.1  ras-related protein Rab-25

    UniProtKB/TrEMBL
    A0A3B3TZR1
    Related
    ENSPLAP00000005962.1, ENSPLAT00000007049.1
    Conserved Domains (2) summary
    smart00175
    Location:11 → 174
    RAB; Rab subfamily of small GTPases
    cd01868
    Location:9 → 172
    Rab11_like; Rab GTPase family 11 (Rab11)-like includes Rab11a, Rab11b, and Rab25
Nucleotide Protein
Heading Accession and Version

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