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LOC106951587 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106951587, updated on 2-Nov-2023

Summary

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Gene symbol
LOC106951587
Gene description
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like
See related
Ensembl:ENSPLAG00000015615
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC106951587 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113081.1 (502799..547269, complement)

NW_015113081.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106951582 Neighboring gene EI24 autophagy associated transmembrane protein Neighboring gene uncharacterized LOC106951595 Neighboring gene beta-galactosidase-1-like protein 2 Neighboring gene uncharacterized LOC106951594 Neighboring gene uncharacterized LOC106951591 Neighboring gene glucose-6-phosphate translocase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113081.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chondroitin sulfate proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113081.1 Reference P_latipinna-1.0

    Range
    502799..547269 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015039224.1 → XP_014894710.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X3

    Conserved Domains (1) summary
    cl11394
    Location:82 → 251
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_015039223.1 → XP_014894709.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X2

    Conserved Domains (1) summary
    cl11394
    Location:82 → 257
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_015039222.1 → XP_014894708.1  galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1-like isoform X1

    UniProtKB/TrEMBL
    A0A3B3VQF0
    Related
    ENSPLAP00000027246.1, ENSPLAT00000019981.1
    Conserved Domains (1) summary
    pfam03360
    Location:103 → 311
    Glyco_transf_43; Glycosyltransferase family 43
Nucleotide Protein
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