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gspt1 G1 to S phase transition 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106951304, updated on 13-Mar-2024

Summary

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Gene symbol
gspt1
Gene description
G1 to S phase transition 1
See related
Ensembl:ENSPLAG00000001492
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See gspt1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113067.1 (644..14000, complement)

NW_015113067.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106951313 Neighboring gene DNA meiotic recombinase 1 Neighboring gene translocase of outer mitochondrial membrane 22 homolog (yeast)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113067.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation release factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of translation release factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113067.1 Reference P_latipinna-1.0

    Range
    644..14000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015038751.1 → XP_014894237.1  eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like

    UniProtKB/TrEMBL
    A0A3B3TK00
    Related
    ENSPLAP00000000636.1, ENSPLAT00000016105.1
    Conserved Domains (4) summary
    cd01883
    Location:163 → 379
    EF1_alpha; Elongation Factor 1-alpha (EF1-alpha) protein family
    pfam00009
    Location:160 → 358
    GTP_EFTU; Elongation factor Tu GTP binding domain
    cd04089
    Location:388 → 469
    eRF3_II; Domain II of the eukaryotic class II release factor
    cl02786
    Location:475 → 513
    Translation_factor_III; Domain III of Elongation factor (EF) Tu (EF-TU) and related proteins
Nucleotide Protein
Heading Accession and Version

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