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LOC106950894 ADP-ribosylation factor 1-like [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106950894, updated on 2-Nov-2023

Summary

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Gene symbol
LOC106950894
Gene description
ADP-ribosylation factor 1-like
See related
Ensembl:ENSPLAG00000015887
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC106950894 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015113043.1 (360481..368185)

NW_015113043.1Genomic Context describing neighboring genes Neighboring gene ddb1 and cul4 associated factor 13 Neighboring gene regulating synaptic membrane exocytosis 2 Neighboring gene ADP-ribosylation factor 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015113043.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015113043.1 Reference P_latipinna-1.0

    Range
    360481..368185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015038059.1 → XP_014893545.1  ADP-ribosylation factor 1-like

    UniProtKB/TrEMBL
    A0A3B3VQQ6
    Related
    ENSPLAP00000027356.1, ENSPLAT00000029614.1
    Conserved Domains (1) summary
    cl21455
    Location:1 → 179
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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