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LOC106950880 histone H2B 1/2-like [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106950880, updated on 2-Nov-2023

Summary

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Gene symbol
LOC106950880
Gene description
histone H2B 1/2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See LOC106950880 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112641.1 (681865..682561)

NW_015112641.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2O Neighboring gene sphingosine kinase 1 Neighboring gene histone H1-like Neighboring gene peroxisomal biogenesis factor 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112641.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2B 1/2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112641.1 Reference P_latipinna-1.0

    Range
    681865..682561
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015038041.1 → XP_014893527.1  histone H2B 1/2-like

    UniProtKB/TrEMBL
    A0A3B3TQN3
    Conserved Domains (2) summary
    smart00427
    Location:46 → 142
    H2B; Histone H2B
    pfam00125
    Location:13 → 120
    Histone; Core histone H2A/H2B/H3/H4
Nucleotide Protein
Heading Accession and Version

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