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srp68 signal recognition particle 68 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106950834, updated on 13-Mar-2024

Summary

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Gene symbol
srp68
Gene description
signal recognition particle 68
See related
Ensembl:ENSPLAG00000013008
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See srp68 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112641.1 (438506..452614)

NW_015112641.1Genomic Context describing neighboring genes Neighboring gene probable ATP-dependent RNA helicase DDX5 Neighboring gene polymerase (DNA directed), gamma 2, accessory subunit Neighboring gene envoplakin a Neighboring gene envoplakin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112641.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 7S RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endoplasmic reticulum signal peptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signal recognition particle binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal recognition particle subunit SRP68

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112641.1 Reference P_latipinna-1.0

    Range
    438506..452614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015037958.1 → XP_014893444.1  signal recognition particle subunit SRP68

    UniProtKB/TrEMBL
    A0A3B3UBE9
    Related
    ENSPLAP00000010106.1, ENSPLAT00000000094.1
    Conserved Domains (1) summary
    pfam16969
    Location:43 → 562
    SRP68; RNA-binding signal recognition particle 68
Nucleotide Protein
Heading Accession and Version

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