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gpn1 GPN-loop GTPase 1 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106949324, updated on 13-Mar-2024

Summary

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Gene symbol
gpn1
Gene description
GPN-loop GTPase 1
See related
Ensembl:ENSPLAG00000023798
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See gpn1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112952.1 (194203..207738)

NW_015112952.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106949321 Neighboring gene FH1/FH2 domain-containing protein 1-like Neighboring gene EMILIN-1-like Neighboring gene uncharacterized LOC106949329 Neighboring gene stathmin-like 4, like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112952.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPN-loop GTPase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112952.1 Reference P_latipinna-1.0

    Range
    194203..207738
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015035488.1 → XP_014890974.1  GPN-loop GTPase 1

    UniProtKB/TrEMBL
    A0A3B3W2H1
    Related
    ENSPLAP00000031638.1, ENSPLAT00000032108.1
    Conserved Domains (3) summary
    COG1100
    Location:34 → 243
    Gem1; GTPase SAR1 family domain [General function prediction only]
    pfam03029
    Location:38 → 278
    ATP_bind_1; Conserved hypothetical ATP binding protein
    cl19511
    Location:257 → 311
    DUF2317; Uncharacterized protein conserved in bacteria (DUF2317)
Nucleotide Protein
Heading Accession and Version

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