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arl6 ARF like GTPase 6 [ Poecilia latipinna (sailfin molly) ]

Gene ID: 106947237, updated on 13-Oct-2024

Summary

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Gene symbol
arl6
Gene description
ARF like GTPase 6
See related
Ensembl:ENSPLAG00000008306
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia latipinna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See arl6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112846.1 (286197..291345)

NW_015112846.1Genomic Context describing neighboring genes Neighboring gene NOP2/Sun RNA methyltransferase 3 Neighboring gene eph receptor A6 Neighboring gene high-affinity choline transporter 1-like Neighboring gene BTB/POZ domain-containing protein KCTD12-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015112846.1 Unplaced Scaffold Reference P_latipinna-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ADP-ribosylation factor-like protein 6
Names
ADP ribosylation factor like GTPase 6
ADP-ribosylation factor-like 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_latipinna-1.0

Genomic

  1. NW_015112846.1 Reference P_latipinna-1.0

    Range
    286197..291345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015032094.1 → XP_014887580.1  ADP-ribosylation factor-like protein 6 isoform X1

    Conserved Domains (2) summary
    smart00178
    Location:1 → 180
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cd04157
    Location:18 → 179
    Arl6; Arf-like 6 (Arl6) GTPase

  2. XM_015032095.1 → XP_014887581.1  ADP-ribosylation factor-like protein 6 isoform X2

    UniProtKB/TrEMBL
    A0A3B3VBN0
    Related
    ENSPLAP00000023170.1, ENSPLAT00000006604.1
    Conserved Domains (2) summary
    smart00178
    Location:1 → 180
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cd04157
    Location:18 → 179
    Arl6; Arf-like 6 (Arl6) GTPase
Nucleotide Protein
Heading Accession and Version

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