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ndst3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [ Poecilia mexicana ]

Gene ID: 106928607, updated on 13-Mar-2024

Summary

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Gene symbol
ndst3
Gene description
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
See related
Ensembl:ENSPMEG00000016578
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See ndst3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015095551.1 (477557..535492, complement)

NW_015095551.1Genomic Context describing neighboring genes Neighboring gene methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit Neighboring gene serine protease 12 Neighboring gene uncharacterized LOC106928603 Neighboring gene UDP glycosyltransferase 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015095551.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015095551.1 Reference P_mexicana-1.0

    Range
    477557..535492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015004969.1 → XP_014860455.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4-like isoform X1

    Conserved Domains (2) summary
    pfam00685
    Location:601 → 852
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:21 → 512
    HSNSD; heparan sulfate-N-deacetylase

  2. XM_015004970.1 → XP_014860456.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4-like isoform X2

    UniProtKB/TrEMBL
    A0A3B3XGP2
    Related
    ENSPMEP00000014207.1, ENSPMET00000022121.1
    Conserved Domains (2) summary
    pfam00685
    Location:601 → 852
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:21 → 512
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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