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tmtc2b transmembrane O-mannosyltransferase targeting cadherins 2b [ Poecilia mexicana ]

Gene ID: 106925776, updated on 13-Mar-2024

Summary

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Gene symbol
tmtc2b
Gene description
transmembrane O-mannosyltransferase targeting cadherins 2b
See related
Ensembl:ENSPMEG00000005469
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See tmtc2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015095310.1 (148847..247433)

NW_015095310.1Genomic Context describing neighboring genes Neighboring gene protein arginine N-methyltransferase 8-B-like Neighboring gene uncharacterized LOC106925775 Neighboring gene calcium release activated channel regulator 2Aa Neighboring gene uncharacterized LOC106925777

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015095310.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015095310.1 Reference P_mexicana-1.0

    Range
    148847..247433
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015000261.1 → XP_014855747.1  transmembrane and TPR repeat-containing protein 2-like

    UniProtKB/TrEMBL
    A0A3B3Y8P1
    Related
    ENSPMEP00000023694.1, ENSPMET00000009514.1
    Conserved Domains (5) summary
    COG0457
    Location:508 → 808
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:495 → 523
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:495 → 522
    TPR_1; Tetratricopeptide repeat
    pfam07719
    Location:647 → 678
    TPR_2; Tetratricopeptide repeat
    pfam08409
    Location:249 → 316
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein
Heading Accession and Version

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