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pus3 pseudouridylate synthase 3 [ Poecilia mexicana ]

Gene ID: 106920262, updated on 13-Mar-2024

Summary

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Gene symbol
pus3
Gene description
pseudouridylate synthase 3
See related
Ensembl:ENSPMEG00000009870
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See pus3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094923.1 (329380..333103)

NW_015094923.1Genomic Context describing neighboring genes Neighboring gene myosin light chain kinase, smooth muscle-like Neighboring gene uncharacterized LOC106920261 Neighboring gene uncharacterized LOC106920266 Neighboring gene CD63 antigen-like Neighboring gene uncharacterized LOC106920267 Neighboring gene dephospho-CoA kinase domain containing

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094923.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tRNA pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA pseudouridine(38/39) synthase
Names
pseudouridine synthase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094923.1 Reference P_mexicana-1.0

    Range
    329380..333103
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014991173.1 → XP_014846659.1  tRNA pseudouridine(38/39) synthase isoform X2

    Conserved Domains (2) summary
    cd02569
    Location:77 → 293
    PseudoU_synth_ScPus3; Pseudouridine synthase, Saccharomyces cerevisiae Pus3 like
    COG0101
    Location:75 → 311
    TruA; tRNA U38,U39,U40 pseudouridine synthase TruA [Translation, ribosomal structure and biogenesis]

  2. XM_014991172.1 → XP_014846658.1  tRNA pseudouridine(38/39) synthase isoform X1

    UniProtKB/TrEMBL
    A0A3B3YG09
    Related
    ENSPMEP00000026304.1, ENSPMET00000002909.1
    Conserved Domains (2) summary
    cd02569
    Location:77 → 341
    PseudoU_synth_ScPus3; Pseudouridine synthase, Saccharomyces cerevisiae Pus3 like
    COG0101
    Location:75 → 359
    TruA; tRNA U38,U39,U40 pseudouridine synthase TruA [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

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