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paip2b poly(A) binding protein interacting protein 2B [ Poecilia mexicana ]

Gene ID: 106916887, updated on 12-Sep-2024

Summary

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Gene symbol
paip2b
Gene description
poly(A) binding protein interacting protein 2B
See related
Ensembl:ENSPMEG00000010323
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See paip2b in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094736.1 (255565..268513, complement)

NW_015094736.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106916884 Neighboring gene N-acetylglucosamine kinase Neighboring gene heat shock protein 12B Neighboring gene chaperonin containing TCP1, subunit 7 (eta) Neighboring gene kelch repeat-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094736.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA regulatory element binding translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polyadenylate-binding protein-interacting protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094736.1 Reference P_mexicana-1.0

    Range
    255565..268513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014985488.1 → XP_014840974.1  polyadenylate-binding protein-interacting protein 2B isoform X2

    UniProtKB/TrEMBL
    A0A3B3YGU5
    Related
    ENSPMEP00000026572.1, ENSPMET00000002235.1
    Conserved Domains (1) summary
    pfam07145
    Location:113 → 128
    PAM2; Ataxin-2 C-terminal region

  2. XM_014985487.1 → XP_014840973.1  polyadenylate-binding protein-interacting protein 2B isoform X1

    UniProtKB/TrEMBL
    A0A3B3X0P5
    Related
    ENSPMEP00000008560.1, ENSPMET00000002242.1
    Conserved Domains (1) summary
    pfam07145
    Location:119 → 134
    PAM2; Ataxin-2 C-terminal region
Nucleotide Protein
Heading Accession and Version

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