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sigmar1 sigma non-opioid intracellular receptor 1 [ Poecilia mexicana ]

Gene ID: 106913946, updated on 13-Mar-2024

Summary

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Gene symbol
sigmar1
Gene description
sigma non-opioid intracellular receptor 1
See related
Ensembl:ENSPMEG00000010876
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See sigmar1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094518.1 (218136..222720)

NW_015094518.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106913866 Neighboring gene galactose-1-phosphate uridylyltransferase Neighboring gene katanin p60 subunit A-like 2 Neighboring gene immediate early response 3 interacting protein 1 Neighboring gene haloacid dehalogenase-like hydrolase domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094518.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sigma non-opioid intracellular receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094518.1 Reference P_mexicana-1.0

    Range
    218136..222720
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014980406.1 → XP_014835892.1  sigma non-opioid intracellular receptor 1

    UniProtKB/TrEMBL
    A0A3B3X200, A0A3B3X251
    Related
    ENSPMEP00000009055.1, ENSPMET00000001433.1
    Conserved Domains (1) summary
    pfam04622
    Location:27 → 211
    ERG2_Sigma1R; ERG2 and Sigma1 receptor like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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