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nsrp1 nuclear speckle splicing regulatory protein 1 [ Poecilia mexicana ]

Gene ID: 106910699, updated on 13-Mar-2024

Summary

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Gene symbol
nsrp1
Gene description
nuclear speckle splicing regulatory protein 1
See related
Ensembl:ENSPMEG00000013288
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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See nsrp1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094600.1 (509334..513183, complement)

NW_015094600.1Genomic Context describing neighboring genes Neighboring gene stromal cell-derived factor 2 Neighboring gene SPT6 homolog, histone chaperone and transcription elongation factor Neighboring gene RAB34, member RAS oncogene family b Neighboring gene uncharacterized LOC106910728 Neighboring gene slingshot protein phosphatase 2b Neighboring gene coronin 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094600.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear speckle splicing regulatory protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094600.1 Reference P_mexicana-1.0

    Range
    509334..513183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014977370.1 → XP_014832856.1  nuclear speckle splicing regulatory protein 1

    UniProtKB/TrEMBL
    A0A3B3YLQ7
    Related
    ENSPMEP00000028296.1, ENSPMET00000018316.1
    Conserved Domains (1) summary
    pfam09745
    Location:57 → 176
    DUF2040; Coiled-coil domain-containing protein 55 (DUF2040)
Nucleotide Protein
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