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LOC106869218 mitochondrial carnitine/acylcarnitine carrier protein [ Octopus bimaculoides (California two-spot octopus) ]

Gene ID: 106869218, updated on 23-Nov-2023

Summary

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Gene symbol
LOC106869218
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
Locus tag
OCBIM_22008582mg
See related
EnsemblRapid:LOC106869218
Gene type
protein coding
RefSeq status
MODEL
Organism
Octopus bimaculoides
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Cephalopoda; Coleoidea; Octopodiformes; Octopoda; Incirrata; Octopodidae; Octopus
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Genomic context

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See LOC106869218 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_01 current ASM119413v2 (GCF_001194135.2) 20 NC_069000.1 (6734380..6744570)
100 previous assembly Octopus_bimaculoides_v2_0 (GCF_001194135.1) Unplaced Scaffold NW_014659984.1 (297528..307491)

Chromosome 20 - NC_069000.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 8 Neighboring gene calmodulin-beta Neighboring gene innexin unc-9 Neighboring gene histone deacetylase 6 Neighboring gene chromosome transmission fidelity protein 8 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_001194135.2-RS_

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM119413v2 Primary Assembly

Genomic

  1. NC_069000.1 Reference ASM119413v2 Primary Assembly

    Range
    6734380..6744570
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014914864.2 → XP_014770350.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    Related
    XP_014770350.1, XM_014914864.2
    Conserved Domains (2) summary
    PTZ00169
    Location:1 → 285
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:102 → 198
    Mito_carr; Mitochondrial carrier protein

  2. XM_052974940.1 → XP_052830900.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    Related
    XP_052830900.1, XM_052974940.1

  3. XM_052974941.1 → XP_052830901.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    Related
    XP_052830901.1, XM_052974941.1
Nucleotide Protein
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