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NT5C3B 5'-nucleotidase, cytosolic IIIB [ Sturnus vulgaris (Common starling) ]

Gene ID: 106858702, updated on 3-Aug-2024

Summary

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Gene symbol
NT5C3B
Gene description
5'-nucleotidase, cytosolic IIIB
Gene type
protein coding
RefSeq status
MODEL
Organism
Sturnus vulgaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sturnidae; Sturnus
Orthologs
human mouse all
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Genomic context

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See NT5C3B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Sturnus_vulgaris-1.0 (GCF_001447265.1) Unplaced Scaffold NW_014650663.1 (1042567..1046500, complement)

NW_014650663.1Genomic Context describing neighboring genes Neighboring gene prolyl 3-hydroxylase family member 4 (inactive) Neighboring gene FKBP prolyl isomerase 10 Neighboring gene kelch like family member 10 Neighboring gene kelch like family member 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014650663.1 Unplaced Scaffold Reference Sturnus_vulgaris-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 5'-nucleotidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
7-methylguanosine phosphate-specific 5'-nucleotidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sturnus vulgaris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sturnus_vulgaris-1.0

Genomic

  1. NW_014650663.1 Reference Sturnus_vulgaris-1.0

    Range
    1042567..1046500 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014885504.1 → XP_014740990.1  7-methylguanosine phosphate-specific 5'-nucleotidase

    Conserved Domains (2) summary
    pfam00702
    Location:75 → 142
    Hydrolase; haloacid dehalogenase-like hydrolase
    pfam05822
    Location:1 → 245
    UMPH-1; Pyrimidine 5'-nucleotidase (UMPH-1)
Nucleotide Protein
Heading Accession and Version

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