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TPI1 triosephosphate isomerase 1 [ Equus asinus (ass) ]

Gene ID: 106847322, updated on 13-Mar-2024

Summary

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Gene symbol
TPI1
Gene description
triosephosphate isomerase 1
See related
Ensembl:ENSEASG00005016069
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TPI1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 22 NC_052198.1 (34622596..34626070)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638362.1 (808016..811512, complement)

Chromosome 22 - NC_052198.1Genomic Context describing neighboring genes Neighboring gene G protein subunit beta 3 Neighboring gene cell division cycle associated 3 Neighboring gene ubiquitin specific peptidase 5 Neighboring gene splA/ryanodine receptor domain and SOCS box containing 2 Neighboring gene leucine rich repeat containing 23

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triose-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triosephosphate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052198.1 Reference ASM1607732v2

    Range
    34622596..34626070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014866541.2 → XP_014722027.1  triosephosphate isomerase

    UniProtKB/TrEMBL
    A0A9L0KEM5
    Related
    ENSEASP00005060977.1, ENSEAST00005043273.1
    Conserved Domains (1) summary
    PTZ00333
    Location:39 → 284
    PTZ00333; triosephosphate isomerase; Provisional
Nucleotide Protein
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Gene LinkOut

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