U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PNPLA3 patatin like phospholipase domain containing 3 [ Equus asinus (ass) ]

Gene ID: 106845951, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
PNPLA3
Gene description
patatin like phospholipase domain containing 3
See related
Ensembl:ENSEASG00005021868
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PNPLA3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 2 NC_052178.1 (6032592..6050977, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638303.1 (1329527..1347832)

Chromosome 2 - NC_052178.1Genomic Context describing neighboring genes Neighboring gene parvin beta Neighboring gene uncharacterized LOC123289169 Neighboring gene SAMM50 sorting and assembly machinery component Neighboring gene uncharacterized LOC106845918 Neighboring gene uncharacterized LOC123289181

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
1-acylglycerol-3-phosphate O-acyltransferase PNPLA3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052178.1 Reference ASM1607732v2

    Range
    6032592..6050977 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014864420.2 → XP_014719906.2  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X2

    Conserved Domains (1) summary
    cl11396
    Location:54 → 235
    Patatin_and_cPLA2; Patatins and Phospholipases

  2. XM_014864417.2 → XP_014719903.2  1-acylglycerol-3-phosphate O-acyltransferase PNPLA3 isoform X1

    UniProtKB/TrEMBL
    A0A8C4MWX9
    Related
    ENSEASP00005032038.2, ENSEAST00005034891.2
    Conserved Domains (1) summary
    cd07221
    Location:54 → 305
    Pat_PNPLA3; Patatin-like phospholipase domain containing protein 3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.