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LOC106845649 polypeptide N-acetylgalactosaminyltransferase 4 [ Equus asinus (ass) ]

Gene ID: 106845649, updated on 13-Mar-2024

Summary

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Gene symbol
LOC106845649
Gene description
polypeptide N-acetylgalactosaminyltransferase 4
See related
Ensembl:ENSEASG00005032213
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
GALNT4
Orthologs
human mouse all
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Genomic context

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See LOC106845649 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 2 NC_052178.1 (19412196..19417683, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638287.1 (776883..782053)

Chromosome 2 - NC_052178.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106845653 Neighboring gene POC1 centriolar protein B Neighboring gene uncharacterized LOC123275810 Neighboring gene uncharacterized LOC106845650 Neighboring gene ATPase plasma membrane Ca2+ transporting 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052178.1 Reference ASM1607732v2

    Range
    19412196..19417683 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014863994.2 → XP_014719480.1  polypeptide N-acetylgalactosaminyltransferase 4

    UniProtKB/TrEMBL
    A0A9L0J9Z5
    Related
    ENSEASP00005050121.1, ENSEAST00005059209.1
    Conserved Domains (4) summary
    cd02510
    Location:142 → 436
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:138 → 434
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:450 → 580
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:450 → 578
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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