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GAA alpha glucosidase [ Equus asinus (ass) ]

Gene ID: 106845535, updated on 13-Mar-2024

Summary

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Gene symbol
GAA
Gene description
alpha glucosidase
See related
Ensembl:ENSEASG00005005100
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See GAA in Genome Data Viewer
Location:
chromosome: 13
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 13 NC_052189.1 (61900463..61919009)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014636893.1 (1918970..1939041)

Chromosome 13 - NC_052189.1Genomic Context describing neighboring genes Neighboring gene TBC1 domain family member 16 Neighboring gene coiled-coil domain 40 molecular ruler complex subunit Neighboring gene eukaryotic translation initiation factor 4A3 Neighboring gene caspase recruitment domain family member 14 Neighboring gene N-sulfoglucosamine sulfohydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lysosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal alpha-glucosidase
Names
glucosidase alpha, acid

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052189.1 Reference ASM1607732v2

    Range
    61900463..61919009
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014863779.2 → XP_014719265.2  lysosomal alpha-glucosidase

    UniProtKB/TrEMBL
    A0A8C4L510, A0A8C4L721
    Conserved Domains (3) summary
    smart00018
    Location:68 → 120
    PD; P or trefoil or TFF domain
    cd06602
    Location:347 → 705
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 347
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  2. XM_014863803.2 → XP_014719289.2  lysosomal alpha-glucosidase

    UniProtKB/TrEMBL
    A0A8C4L510, A0A8C4L721
    Conserved Domains (3) summary
    smart00018
    Location:68 → 120
    PD; P or trefoil or TFF domain
    cd06602
    Location:347 → 705
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 347
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  3. XM_014863792.2 → XP_014719278.2  lysosomal alpha-glucosidase

    UniProtKB/TrEMBL
    A0A8C4L510, A0A8C4L721
    Conserved Domains (3) summary
    smart00018
    Location:68 → 120
    PD; P or trefoil or TFF domain
    cd06602
    Location:347 → 705
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 347
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  4. XM_014863785.2 → XP_014719271.2  lysosomal alpha-glucosidase

    UniProtKB/TrEMBL
    A0A8C4L510, A0A8C4L721
    Related
    ENSEASP00005006914.2, ENSEAST00005007553.2
    Conserved Domains (3) summary
    smart00018
    Location:68 → 120
    PD; P or trefoil or TFF domain
    cd06602
    Location:347 → 705
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 347
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  5. XM_044744700.1 → XP_044600635.1  lysosomal alpha-glucosidase

    UniProtKB/TrEMBL
    A0A8C4L510, A0A8C4L721
    Conserved Domains (3) summary
    smart00018
    Location:68 → 120
    PD; P or trefoil or TFF domain
    cd06602
    Location:347 → 705
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 347
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

  6. XM_044744701.1 → XP_044600636.1  lysosomal alpha-glucosidase

    UniProtKB/TrEMBL
    A0A8C4L510, A0A8C4L721
    Conserved Domains (3) summary
    smart00018
    Location:68 → 120
    PD; P or trefoil or TFF domain
    cd06602
    Location:347 → 705
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:234 → 347
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
Nucleotide Protein
Heading Accession and Version

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