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PIGB phosphatidylinositol glycan anchor biosynthesis class B [ Equus asinus (ass) ]

Gene ID: 106843420, updated on 13-Mar-2024

Summary

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Gene symbol
PIGB
Gene description
phosphatidylinositol glycan anchor biosynthesis class B
See related
Ensembl:ENSEASG00005009821
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PIGB in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 2 NC_052178.1 (180408879..180433526, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638228.1 (278233..302865)

Chromosome 2 - NC_052178.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 4 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene piercer of microtubule wall 2 Neighboring gene cell cycle progression 1 Neighboring gene PIGB opposite strand 1 Neighboring gene uncharacterized LOC123282938 Neighboring gene RAB27A, member RAS oncogene family

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052178.1 Reference ASM1607732v2

    Range
    180408879..180433526 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044764854.1 → XP_044620789.1  GPI mannosyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C4LP04
    Conserved Domains (1) summary
    cl21590
    Location:38 → 495
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase

  2. XM_014860441.2 → XP_014715927.2  GPI mannosyltransferase 3 isoform X1

    UniProtKB/TrEMBL
    A0A8C4LP04
    Related
    ENSEASP00005014094.2, ENSEAST00005015312.2
    Conserved Domains (1) summary
    cl21590
    Location:38 → 530
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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Gene LinkOut

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