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TBXAS1 thromboxane A synthase 1 [ Equus asinus (ass) ]

Gene ID: 106842627, updated on 13-Mar-2024

Summary

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Gene symbol
TBXAS1
Gene description
thromboxane A synthase 1
See related
Ensembl:ENSEASG00005009927
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TBXAS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 1 NC_052177.1 (9010114..9152555, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638192.1 (2092041..2237404, complement)

Chromosome 1 - NC_052177.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 7A Neighboring gene poly(ADP-ribose) polymerase family member 12 Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene uncharacterized LOC123288218 Neighboring gene C-type lectin domain family 2 member L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables thromboxane-A synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thromboxane-A synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052177.1 Reference ASM1607732v2

    Range
    9010114..9152555 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014859250.2 → XP_014714736.2  thromboxane-A synthase isoform X1

    UniProtKB/TrEMBL
    A0A8C4LVN8
    Related
    ENSEASP00005014224.2, ENSEAST00005015463.2
    Conserved Domains (1) summary
    COG2124
    Location:47 → 533
    CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]

  2. XM_014859251.2 → XP_014714737.2  thromboxane-A synthase isoform X3

    UniProtKB/TrEMBL
    A0A8C4LVN8
    Conserved Domains (1) summary
    COG2124
    Location:13 → 471
    CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]

  3. XM_044775776.1 → XP_044631711.1  thromboxane-A synthase isoform X2

    UniProtKB/TrEMBL
    A0A9L0K421
    Related
    ENSEASP00005060246.1, ENSEAST00005045690.1
    Conserved Domains (1) summary
    COG2124
    Location:47 → 373
    CypX; Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism, Defense mechanisms]
Nucleotide Protein
Heading Accession and Version

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