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ACSM5 acyl-CoA synthetase medium chain family member 5 [ Equus asinus (ass) ]

Gene ID: 106841736, updated on 13-Mar-2024

Summary

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Gene symbol
ACSM5
Gene description
acyl-CoA synthetase medium chain family member 5
See related
Ensembl:ENSEASG00005037187
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ACSM5 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 14 NC_052190.1 (22292466..22327633)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638161.1 (161600..198869)

Chromosome 14 - NC_052190.1Genomic Context describing neighboring genes Neighboring gene uromodulin Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene collagen alpha-1(I) chain-like Neighboring gene DNA topoisomerase 3-beta-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: acyl-coenzyme A synthetase ACSM5, mitochondrial
Names
acyl-coenzyme A synthetase ACSM5, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052190.1 Reference ASM1607732v2

    Range
    22292466..22327633
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014857884.2 → XP_014713370.2  LOW QUALITY PROTEIN: acyl-coenzyme A synthetase ACSM5, mitochondrial

    UniProtKB/TrEMBL
    A0A9L0JPN7
    Related
    ENSEASP00005051110.1, ENSEAST00005072860.1
    Conserved Domains (1) summary
    cl17068
    Location:49 → 577
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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