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B4GALT1 beta-1,4-galactosyltransferase 1 [ Equus asinus (ass) ]

Gene ID: 106841463, updated on 13-Mar-2024

Summary

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Gene symbol
B4GALT1
Gene description
beta-1,4-galactosyltransferase 1
See related
Ensembl:ENSEASG00005004276
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See B4GALT1 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 23 NC_052199.1 (6216968..6264630)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638153.1 (352031..400963)

Chromosome 23 - NC_052199.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123280265 Neighboring gene uncharacterized LOC106841462 Neighboring gene SMU1 DNA replication regulator and spliceosomal factor Neighboring gene uncharacterized LOC106841466

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052199.1 Reference ASM1607732v2

    Range
    6216968..6264630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014857497.2 → XP_014712983.1  beta-1,4-galactosyltransferase 1

    UniProtKB/TrEMBL
    A0A9L0JV87
    Related
    ENSEASP00005053045.1, ENSEAST00005077824.1
    Conserved Domains (1) summary
    cd00899
    Location:175 → 393
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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