U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

UMOD uromodulin [ Equus asinus (ass) ]

Gene ID: 106839011, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
UMOD
Gene description
uromodulin
See related
Ensembl:ENSEASG00005010630
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See UMOD in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 14 NC_052190.1 (22239506..22254081, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638087.1 (420668..433709)

Chromosome 14 - NC_052190.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 139 Neighboring gene glycoprotein 2 Neighboring gene protein disulfide isomerase like, testis expressed Neighboring gene acyl-CoA synthetase medium chain family member 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neutrophil migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
uromodulin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052190.1 Reference ASM1607732v2

    Range
    22239506..22254081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014853437.2 → XP_014708923.1  uromodulin isoform X2

    UniProtKB/TrEMBL
    A0A8C4PM36, A0A9L0IQZ2
    Related
    ENSEASP00005043386.1, ENSEAST00005073187.1
    Conserved Domains (5) summary
    smart00179
    Location:110 → 151
    EGF_CA; Calcium-binding EGF-like domain
    smart00241
    Location:336 → 585
    ZP; Zona pellucida (ZP) domain
    pfam00100
    Location:465 → 585
    Zona_pellucida; Zona pellucida-like domain
    pfam07645
    Location:67 → 105
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:36 → 65
    EGF_3; EGF domain

  2. XM_014853438.2 → XP_014708924.1  uromodulin isoform X1

    UniProtKB/TrEMBL
    A0A8C4PM36
    Conserved Domains (4) summary
    smart00179
    Location:110 → 151
    EGF_CA; Calcium-binding EGF-like domain
    smart00241
    Location:336 → 585
    ZP; Zona pellucida (ZP) domain
    pfam07645
    Location:67 → 105
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:36 → 65
    EGF_3; EGF domain

  3. XM_044747541.1 → XP_044603476.1  uromodulin isoform X1

    UniProtKB/TrEMBL
    A0A8C4PM36
    Conserved Domains (4) summary
    smart00179
    Location:110 → 151
    EGF_CA; Calcium-binding EGF-like domain
    smart00241
    Location:336 → 585
    ZP; Zona pellucida (ZP) domain
    pfam07645
    Location:67 → 105
    EGF_CA; Calcium-binding EGF domain
    pfam12947
    Location:36 → 65
    EGF_3; EGF domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.