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MGAT4C MGAT4 family member C [ Equus asinus (ass) ]

Gene ID: 106838333, updated on 13-Mar-2024

Summary

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Gene symbol
MGAT4C
Gene description
MGAT4 family member C
See related
Ensembl:ENSEASG00005027905
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MGAT4C in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 2 NC_052178.1 (16515446..16725714, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638065.1 (382116..424162)

Chromosome 2 - NC_052178.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 263 Neighboring gene mitochondrial transcription termination factor 2 Neighboring gene uncharacterized LOC123283226 Neighboring gene chromosome 2 C12orf50 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052178.1 Reference ASM1607732v2

    Range
    16515446..16725714 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044781195.1 → XP_044637130.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    UniProtKB/TrEMBL
    A0A8C4MMG3, A0A9L0K5W7
    Conserved Domains (2) summary
    pfam04666
    Location:64 → 330
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    cd21105
    Location:29 → 41
    PGAP4-like; putative TM1 helix [structural motif]

  2. XM_044781188.1 → XP_044637123.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    UniProtKB/TrEMBL
    A0A8C4MMG3, A0A9L0K5W7
    Conserved Domains (2) summary
    pfam04666
    Location:64 → 330
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    cd21105
    Location:29 → 41
    PGAP4-like; putative TM1 helix [structural motif]

  3. XM_044781184.1 → XP_044637119.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    UniProtKB/TrEMBL
    A0A8C4MMG3, A0A9L0K5W7
    Related
    ENSEASP00005056720.1, ENSEAST00005070941.1
    Conserved Domains (2) summary
    pfam04666
    Location:64 → 330
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
    cd21105
    Location:29 → 41
    PGAP4-like; putative TM1 helix [structural motif]
Nucleotide Protein
Heading Accession and Version

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