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FUCA2 alpha-L-fucosidase 2 [ Equus asinus (ass) ]

Gene ID: 106837240, updated on 13-Mar-2024

Summary

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Gene symbol
FUCA2
Gene description
alpha-L-fucosidase 2
See related
Ensembl:ENSEASG00005009528
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See FUCA2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 1 NC_052177.1 (82081319..82099781)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638036.1 (10181651..10202509)

Chromosome 1 - NC_052177.1Genomic Context describing neighboring genes Neighboring gene LTV1 ribosome biogenesis factor Neighboring gene phosphatase and actin regulator 2 Neighboring gene uncharacterized LOC123285257 Neighboring gene uncharacterized LOC123285262 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene adenosine deaminase tRNA specific 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-L-fucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycoside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: plasma alpha-L-fucosidase
Names
fucosidase, alpha-L- 2, plasma

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052177.1 Reference ASM1607732v2

    Range
    82081319..82099781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014850688.2 → XP_014706174.2  LOW QUALITY PROTEIN: plasma alpha-L-fucosidase

    UniProtKB/TrEMBL
    A0A8C4LU95
    Related
    ENSEASP00005013638.2, ENSEAST00005014809.2
    Conserved Domains (1) summary
    smart00812
    Location:89 → 472
    Alpha_L_fucos; Alpha-L-fucosidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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