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COLGALT2 collagen beta(1-O)galactosyltransferase 2 [ Equus asinus (ass) ]

Gene ID: 106836999, updated on 13-Mar-2024

Summary

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Gene symbol
COLGALT2
Gene description
collagen beta(1-O)galactosyltransferase 2
See related
Ensembl:ENSEASG00005006501
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See COLGALT2 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 25 NC_052201.1 (28959273..29070248)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638032.1 (853914..899874, complement)

Chromosome 25 - NC_052201.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123280812 Neighboring gene tRNA splicing endonuclease subunit 15 Neighboring gene ral guanine nucleotide dissociation stimulator like 1 Neighboring gene uncharacterized LOC123280552 Neighboring gene apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
procollagen galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052201.1 Reference ASM1607732v2

    Range
    28959273..29070248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044757666.1 → XP_044613601.1  procollagen galactosyltransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C4LGV3, A0A9L0JNP0
    Related
    ENSEASP00005009072.1, ENSEAST00005009880.2
    Conserved Domains (2) summary
    cd00761
    Location:57 → 186
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl01298
    Location:341 → 526
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...

  2. XM_044757667.1 → XP_044613602.1  procollagen galactosyltransferase 2 isoform X2

    Conserved Domains (1) summary
    cl01298
    Location:221 → 406
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
Nucleotide Protein
Heading Accession and Version

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