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PIGK phosphatidylinositol glycan anchor biosynthesis class K [ Equus asinus (ass) ]

Gene ID: 106836585, updated on 13-Mar-2024

Summary

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Gene symbol
PIGK
Gene description
phosphatidylinositol glycan anchor biosynthesis class K
See related
Ensembl:ENSEASG00005017179
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PIGK in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 16 NC_052192.1 (36474196..36581951)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014636782.1 (1860484..1967046, complement)

Chromosome 16 - NC_052192.1Genomic Context describing neighboring genes Neighboring gene zinc finger ZZ-type containing 3 Neighboring gene uncharacterized LOC123277745 Neighboring gene adenylate kinase 5 Neighboring gene protein tyrosine phosphatase type IVA 1-like Neighboring gene uncharacterized LOC123277513 Neighboring gene uncharacterized LOC123277675 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 Neighboring gene uncharacterized LOC123277635

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GPI-anchor transamidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI-anchor transamidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052192.1 Reference ASM1607732v2

    Range
    36474196..36581951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014849589.2 → XP_014705075.1  GPI-anchor transamidase

    UniProtKB/TrEMBL
    A0A8C4PRG3, A0A8C4PRS4
    Related
    ENSEASP00005025235.1, ENSEAST00005027397.2
    Conserved Domains (1) summary
    cl00042
    Location:42 → 317
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  2. XM_044748901.1 → XP_044604836.1  GPI-anchor transamidase

    UniProtKB/TrEMBL
    A0A8C4PRG3, A0A8C4PRS4
    Related
    ENSEASP00005025236.2, ENSEAST00005027398.2
    Conserved Domains (1) summary
    cl00042
    Location:42 → 317
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
Nucleotide Protein
Heading Accession and Version

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