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LPIN3 lipin 3 [ Equus asinus (ass) ]

Gene ID: 106834355, updated on 13-Mar-2024

Summary

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Gene symbol
LPIN3
Gene description
lipin 3
See related
Ensembl:ENSEASG00005023437
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LPIN3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 15 NC_052191.1 (31329149..31346384)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637970.1 (2941220..2958409, complement)

Chromosome 15 - NC_052191.1Genomic Context describing neighboring genes Neighboring gene WAS/WASL-interacting protein family member 2-like Neighboring gene phospholipase C gamma 1 Neighboring gene uncharacterized LOC123277471 Neighboring gene zinc fingers and homeoboxes 3 Neighboring gene elastin microfibril interfacer 3 Neighboring gene U6 spliceosomal RNA Neighboring gene chromodomain helicase DNA binding protein 6 Neighboring gene 40S ribosomal protein S26-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to insulin stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidate phosphatase LPIN3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052191.1 Reference ASM1607732v2

    Range
    31329149..31346384
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044748173.1 → XP_044604108.1  phosphatidate phosphatase LPIN3 isoform X1

    UniProtKB/TrEMBL
    A0A8C4N6S5
    Related
    ENSEASP00005034337.2, ENSEAST00005037426.2
    Conserved Domains (2) summary
    smart00775
    Location:648 → 804
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    COG5083
    Location:12 → 118
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  2. XM_044748174.1 → XP_044604109.1  phosphatidate phosphatase LPIN3 isoform X2

    Conserved Domains (2) summary
    smart00775
    Location:647 → 803
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    COG5083
    Location:12 → 118
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  3. XM_044748177.1 → XP_044604112.1  phosphatidate phosphatase LPIN3 isoform X4

    UniProtKB/TrEMBL
    A0A9L0IP81
    Related
    ENSEASP00005041932.1, ENSEAST00005057096.1
    Conserved Domains (3) summary
    smart00775
    Location:620 → 776
    LNS2; This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins
    PHA03247
    Location:109 → 413
    PHA03247; large tegument protein UL36; Provisional
    COG5083
    Location:12 → 118
    SMP2; Phosphatidate phosphatase PAH1, contains Lipin and LNS2 domains. can be involved in plasmid maintenance [Lipid transport and metabolism]

  4. XM_044748175.1 → XP_044604110.1  phosphatidate phosphatase LPIN3 isoform X3

    UniProtKB/TrEMBL
    A0A9L0JFX5
    Conserved Domains (4) summary
    PHA03247
    Location:68 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:589 → 814
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:435 → 526
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  5. XM_044748176.1 → XP_044604111.1  phosphatidate phosphatase LPIN3 isoform X3

    UniProtKB/TrEMBL
    A0A9L0JFX5
    Conserved Domains (4) summary
    PHA03247
    Location:68 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:589 → 814
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:435 → 526
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  6. XM_014845937.2 → XP_014701423.1  phosphatidate phosphatase LPIN3 isoform X3

    UniProtKB/TrEMBL
    A0A9L0JFX5
    Conserved Domains (4) summary
    PHA03247
    Location:68 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:589 → 814
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:435 → 526
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  7. XM_014845936.2 → XP_014701422.1  phosphatidate phosphatase LPIN3 isoform X3

    UniProtKB/TrEMBL
    A0A9L0JFX5
    Conserved Domains (4) summary
    PHA03247
    Location:68 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:589 → 814
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:435 → 526
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

  8. XM_014845935.2 → XP_014701421.1  phosphatidate phosphatase LPIN3 isoform X3

    UniProtKB/TrEMBL
    A0A9L0JFX5
    Related
    ENSEASP00005048110.1, ENSEAST00005050565.1
    Conserved Domains (4) summary
    PHA03247
    Location:68 → 430
    PHA03247; large tegument protein UL36; Provisional
    pfam04571
    Location:1 → 107
    Lipin_N; lipin, N-terminal conserved region
    pfam08235
    Location:589 → 814
    LNS2; LNS2 (Lipin/Ned1/Smp2)
    pfam16876
    Location:435 → 526
    Lipin_mid; Lipin/Ned1/Smp2 multi-domain protein middle domain

RNA

  1. XR_006513874.1 RNA Sequence

  2. XR_006513873.1 RNA Sequence

  3. XR_006513872.1 RNA Sequence

Nucleotide Protein
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