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SGCG sarcoglycan gamma [ Equus asinus (ass) ]

Gene ID: 106832452, updated on 13-Mar-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
See related
Ensembl:ENSEASG00005022775
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 9 NC_052185.1 (19646249..19762003, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637820.1 (2807697..2924446, complement)

Chromosome 9 - NC_052185.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 19 Neighboring gene sacsin molecular chaperone Neighboring gene uncharacterized LOC123288729 Neighboring gene tigger transposable element-derived protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052185.1 Reference ASM1607732v2

    Range
    19646249..19762003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014843231.2 → XP_014698717.2  gamma-sarcoglycan

    UniProtKB/TrEMBL
    A0A9L0IWT2, A0A9L0K6L3
    Related
    ENSEASP00005041539.1, ENSEAST00005045546.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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