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ICOS inducible T cell costimulator [ Equus asinus (ass) ]

Gene ID: 106828144, updated on 13-Mar-2024

Summary

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Gene symbol
ICOS
Gene description
inducible T cell costimulator
See related
Ensembl:ENSEASG00005002854
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See ICOS in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 4 NC_052180.1 (13262309..13284711, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014637069.1 (445581..469721)

Chromosome 4 - NC_052180.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106828145 Neighboring gene uncharacterized LOC123284964 Neighboring gene cytotoxic T-lymphocyte associated protein 4 Neighboring gene CD28 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in T cell costimulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell tolerance induction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inducible T-cell costimulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052180.1 Reference ASM1607732v2

    Range
    13262309..13284711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014836391.2 → XP_014691877.1  inducible T-cell costimulator isoform X1

    UniProtKB/TrEMBL
    A0A9L0J0R6
    Conserved Domains (1) summary
    pfam15910
    Location:38 → 149
    V-set_2; ICOS V-set domain

  2. XM_014836392.2 → XP_014691878.1  inducible T-cell costimulator isoform X2

    UniProtKB/TrEMBL
    A0A9L0J0R6, A0A9L0KCM2
    Related
    ENSEASP00005063202.1, ENSEAST00005072826.1
    Conserved Domains (1) summary
    pfam15910
    Location:23 → 134
    V-set_2; ICOS V-set domain

  3. XM_044768355.1 → XP_044624290.1  inducible T-cell costimulator isoform X3

    UniProtKB/TrEMBL
    A0A9L0J0R6
    Conserved Domains (1) summary
    pfam15910
    Location:1 → 105
    V-set_2; ICOS V-set domain
Nucleotide Protein
Heading Accession and Version

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