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B4GALNT2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) [ Equus asinus (ass) ]

Gene ID: 106826472, updated on 13-Mar-2024

Summary

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Gene symbol
B4GALNT2
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)
See related
Ensembl:ENSEASG00005000271
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See B4GALNT2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
12
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 13 NC_052189.1 (39626685..39681160, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638702.1 (7055995..7110660, complement)

Chromosome 13 - NC_052189.1Genomic Context describing neighboring genes Neighboring gene G protein subunit gamma transducin 2 Neighboring gene transfer RNA glutamine (anticodon UUG) Neighboring gene small nucleolar RNA SNORA12 Neighboring gene methyl-CpG-binding domain protein 3-like 2B Neighboring gene insulin like growth factor 2 mRNA binding protein 1 Neighboring gene gastric inhibitory polypeptide

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-N-acetylgalactosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in UDP-N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052189.1 Reference ASM1607732v2

    Range
    39626685..39681160 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044745658.1 → XP_044601593.1  beta-1,4 N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8C4KR01
    Conserved Domains (1) summary
    pfam00535
    Location:263 → 369
    Glycos_transf_2; Glycosyl transferase family 2

  2. XM_014833830.2 → XP_014689316.1  beta-1,4 N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8C4KR01
    Related
    ENSEASP00005000256.2, ENSEAST00005000335.2
    Conserved Domains (1) summary
    pfam00535
    Location:263 → 369
    Glycos_transf_2; Glycosyl transferase family 2
Nucleotide Protein
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