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PNPLA2 patatin like phospholipase domain containing 2 [ Equus asinus (ass) ]

Gene ID: 106824961, updated on 18-Sep-2024

Summary

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Gene symbol
PNPLA2
Gene description
patatin like phospholipase domain containing 2
See related
Ensembl:ENSEASG00005007458
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See PNPLA2 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 17 NC_052193.1 (44613425..44619448, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638609.1 (286009..291311, complement)

Chromosome 17 - NC_052193.1Genomic Context describing neighboring genes Neighboring gene CD151 molecule (Raph blood group) Neighboring gene calcium release activated channel regulator 2B Neighboring gene small nucleolar RNA SNORA52 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene p53-induced death domain protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052193.1 Reference ASM1607732v2

    Range
    44613425..44619448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044750134.1 → XP_044606069.1  patatin-like phospholipase domain-containing protein 2 isoform X2

    Conserved Domains (1) summary
    cd07220
    Location:5 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2

  2. XM_044750132.1 → XP_044606067.1  patatin-like phospholipase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C4PJW4, A0A9L0JSF3
    Related
    ENSEASP00005010510.1, ENSEAST00005011437.2
    Conserved Domains (1) summary
    cd07220
    Location:5 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2

  3. XM_044750133.1 → XP_044606068.1  patatin-like phospholipase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C4PJW4, A0A9L0JSF3
    Conserved Domains (1) summary
    cd07220
    Location:5 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2
Nucleotide Protein
Heading Accession and Version

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