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CPT1C carnitine palmitoyltransferase 1C [ Equus asinus (ass) ]

Gene ID: 106824163, updated on 13-Mar-2024

Summary

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Gene symbol
CPT1C
Gene description
carnitine palmitoyltransferase 1C
See related
Ensembl:ENSEASG00005005975
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CPT1C in Genome Data Viewer
Location:
chromosome: 26
Exon count:
17
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 26 NC_052202.1 (19651241..19666489)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638557.1 (136859..159995)

Chromosome 26 - NC_052202.1Genomic Context describing neighboring genes Neighboring gene BCL2 like 12 Neighboring gene protein arginine methyltransferase 1 Neighboring gene testis specific serine kinase substrate Neighboring gene uncharacterized LOC123281265

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, brain isoform

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052202.1 Reference ASM1607732v2

    Range
    19651241..19666489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044759099.1 → XP_044615034.1  carnitine O-palmitoyltransferase 1, brain isoform isoform X1

    UniProtKB/TrEMBL
    A0A8C4LDL0
    Related
    ENSEASP00005009523.2, ENSEAST00005010343.2

  2. XM_044759100.1 → XP_044615035.1  carnitine O-palmitoyltransferase 1, brain isoform isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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