U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PCYT1B phosphate cytidylyltransferase 1B, choline [ Equus asinus (ass) ]

Gene ID: 106824117, updated on 13-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
PCYT1B
Gene description
phosphate cytidylyltransferase 1B, choline
See related
Ensembl:ENSEASG00005017714
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PCYT1B in Genome Data Viewer
Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) X NC_052207.1 (55503628..55629964)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638553.1 (168448..293587, complement)

Chromosome X - NC_052207.1Genomic Context describing neighboring genes Neighboring gene DNA polymerase alpha 1, catalytic subunit Neighboring gene small Cajal body-specific RNA 24 Neighboring gene uncharacterized LOC123282483 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC123282484 Neighboring gene pyruvate dehydrogenase kinase 3 Neighboring gene uncharacterized LOC123282524

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline-phosphate cytidylyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylcholine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CDP-choline pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
choline-phosphate cytidylyltransferase B
Names
phosphate cytidylyltransferase 1, choline, beta

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052207.1 Reference ASM1607732v2

    Range
    55503628..55629964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014830259.2 → XP_014685745.1  choline-phosphate cytidylyltransferase B isoform X2

    UniProtKB/TrEMBL
    A0A9L0I5H1, A0A9L0IW37
    Related
    ENSEASP00005044323.1, ENSEAST00005046829.1
    Conserved Domains (1) summary
    cd02174
    Location:60 → 209
    CCT; CTP:phosphocholine cytidylyltransferase

  2. XM_044763687.1 → XP_044619622.1  choline-phosphate cytidylyltransferase B isoform X4

    Conserved Domains (1) summary
    PLN02413
    Location:43 → 283
    PLN02413; choline-phosphate cytidylyltransferase

  3. XM_044763689.1 → XP_044619624.1  choline-phosphate cytidylyltransferase B isoform X5

    UniProtKB/TrEMBL
    A0A9L0I5H1
    Related
    ENSEASP00005025961.2, ENSEAST00005028184.2
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 293
    PLN02413; choline-phosphate cytidylyltransferase

  4. XM_014830258.2 → XP_014685744.1  choline-phosphate cytidylyltransferase B isoform X1

    UniProtKB/TrEMBL
    A0A9L0I4L8, A0A9L0I5H1
    Related
    ENSEASP00005034928.1, ENSEAST00005060376.1
    Conserved Domains (1) summary
    PLN02413
    Location:72 → 314
    PLN02413; choline-phosphate cytidylyltransferase

  5. XM_014830261.2 → XP_014685747.1  choline-phosphate cytidylyltransferase B isoform X6

    Conserved Domains (1) summary
    cd02174
    Location:9 → 158
    CCT; CTP:phosphocholine cytidylyltransferase

  6. XM_044763684.1 → XP_044619619.1  choline-phosphate cytidylyltransferase B isoform X3

    UniProtKB/TrEMBL
    A0A9L0I5H1
    Conserved Domains (1) summary
    PLN02413
    Location:46 → 288
    PLN02413; choline-phosphate cytidylyltransferase

  7. XM_044763686.1 → XP_044619621.1  choline-phosphate cytidylyltransferase B isoform X4

    Conserved Domains (1) summary
    PLN02413
    Location:43 → 283
    PLN02413; choline-phosphate cytidylyltransferase

  8. XM_044763685.1 → XP_044619620.1  choline-phosphate cytidylyltransferase B isoform X4

    Conserved Domains (1) summary
    PLN02413
    Location:43 → 283
    PLN02413; choline-phosphate cytidylyltransferase

  9. XM_044763683.1 → XP_044619618.1  choline-phosphate cytidylyltransferase B isoform X3

    UniProtKB/TrEMBL
    A0A9L0I5H1
    Conserved Domains (1) summary
    PLN02413
    Location:46 → 288
    PLN02413; choline-phosphate cytidylyltransferase

  10. XM_044763688.1 → XP_044619623.1  choline-phosphate cytidylyltransferase B isoform X4

    Conserved Domains (1) summary
    PLN02413
    Location:43 → 283
    PLN02413; choline-phosphate cytidylyltransferase

  11. XM_014830260.2 → XP_014685746.1  choline-phosphate cytidylyltransferase B isoform X7

    UniProtKB/TrEMBL
    A0A9L0I5H1, A0A9L0KLU5
    Related
    ENSEASP00005062906.1, ENSEAST00005052328.1
    Conserved Domains (1) summary
    cd02174
    Location:55 → 204
    CCT; CTP:phosphocholine cytidylyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.