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SLC17A5 solute carrier family 17 member 5 [ Equus asinus (ass) ]

Gene ID: 106823135, updated on 13-Mar-2024

Summary

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Gene symbol
SLC17A5
Gene description
solute carrier family 17 member 5
See related
Ensembl:ENSEASG00005004314
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See SLC17A5 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
14
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 24 NC_052200.1 (336371..405863, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638490.1 (46611..115166, complement)

Chromosome 24 - NC_052200.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial tRNA translation optimization 1 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 Neighboring gene uncharacterized LOC123280388 Neighboring gene small integral membrane protein 30-like Neighboring gene small integral membrane protein 29-like Neighboring gene CD109 molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sialin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052200.1 Reference ASM1607732v2

    Range
    336371..405863 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044757364.1 → XP_044613299.1  sialin isoform X2

    UniProtKB/TrEMBL
    A0A9L0JI06
    Related
    ENSEASP00005048840.1, ENSEAST00005077320.1
    Conserved Domains (1) summary
    cl28910
    Location:91 → 469
    MFS; Major Facilitator Superfamily

  2. XM_014828636.2 → XP_014684122.2  sialin isoform X1

    UniProtKB/TrEMBL
    A0A8C4PHQ3, A0A9L0J315
    Related
    ENSEASP00005043670.1, ENSEAST00005049830.1
    Conserved Domains (1) summary
    cd17381
    Location:91 → 527
    MFS_SLC17A5; Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters

  3. XM_044757366.1 → XP_044613301.1  sialin isoform X5

    UniProtKB/TrEMBL
    A0A8C4LC81, A0A9L0K696
    Related
    ENSEASP00005060869.1, ENSEAST00005058459.1
    Conserved Domains (1) summary
    cd17381
    Location:1 → 412
    MFS_SLC17A5; Solute carrier family 17 member 5 (also called sialin) of the Major Facilitator Superfamily of transporters

  4. XM_014828638.2 → XP_014684124.1  sialin isoform X4

    UniProtKB/TrEMBL
    A0A8C4LC81, A0A9L0JTP4
    Related
    ENSEASP00005056681.1, ENSEAST00005065237.1
    Conserved Domains (2) summary
    cd06174
    Location:84 → 461
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00894
    Location:18 → 474
    2A0114euk; Na(+)-dependent inorganic phosphate cotransporter

  5. XM_044757365.1 → XP_044613300.1  sialin isoform X3

    UniProtKB/TrEMBL
    A0A8C4PHQ3, A0A9L0I4T3
    Related
    ENSEASP00005035029.1, ENSEAST00005047385.1
    Conserved Domains (1) summary
    cl28910
    Location:91 → 472
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

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