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TKT transketolase [ Equus asinus (ass) ]

Gene ID: 106822998, updated on 13-Mar-2024

Summary

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Gene symbol
TKT
Gene description
transketolase
See related
Ensembl:ENSEASG00005014961
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus asinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See TKT in Genome Data Viewer
Location:
chromosome: 21
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM1607732v2 (GCF_016077325.2) 21 NC_052197.1 (62255347..62280581, complement)
100 previous assembly ASM130575v1 (GCF_001305755.1) Unplaced Scaffold NW_014638481.1 (2820273..2835982, complement)

Chromosome 21 - NC_052197.1Genomic Context describing neighboring genes Neighboring gene RFT1 homolog Neighboring gene protein kinase C delta Neighboring gene decapping mRNA 1A Neighboring gene calcium voltage-gated channel subunit alpha1 D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables thiamine pyrophosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt, non-oxidative branch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribose phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus asinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1607732v2

Genomic

  1. NC_052197.1 Reference ASM1607732v2

    Range
    62255347..62280581 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044754457.1 → XP_044610392.1  transketolase isoform X1

    UniProtKB/TrEMBL
    A0A8C4M5G7
    Related
    ENSEASP00005021907.2, ENSEAST00005023768.2
    Conserved Domains (1) summary
    PRK05899
    Location:8 → 620
    PRK05899; transketolase; Reviewed

  2. XM_044754458.1 → XP_044610393.1  transketolase isoform X2

    UniProtKB/TrEMBL
    A0A8C4M8Z8
    Related
    ENSEASP00005021905.2, ENSEAST00005023766.2
    Conserved Domains (1) summary
    PRK05899
    Location:1 → 573
    PRK05899; transketolase; Reviewed
Nucleotide Protein
Heading Accession and Version

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