U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC106777230 laccase-12 [ Vigna radiata ]

Gene ID: 106777230, updated on 11-Jan-2024

Summary

Go to the top of the page Help
Gene symbol
LOC106777230
Gene description
laccase-12
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna radiata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC106777230 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Vradiata_ver6 (GCF_000741045.1) 2 NC_028352.1 (23313569..23316534)

Chromosome 2 - NC_028352.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106753495 Neighboring gene probably inactive leucine-rich repeat receptor-like protein kinase IMK2 Neighboring gene uncharacterized LOC106753504 Neighboring gene abscisic acid receptor PYL4

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_028352.1 Chromosome 2 Reference Vradiata_ver6 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
laccase-12

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vradiata_ver6 Primary Assembly

Genomic

  1. NC_028352.1 Reference Vradiata_ver6 Primary Assembly

    Range
    23313569..23316534
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014664791.2 → XP_014520277.1  laccase-12

    UniProtKB/TrEMBL
    A0A1S3VQ12
    Conserved Domains (4) summary
    cd13849
    Location:30 → 146
    CuRO_1_LCC_plant; The first cupredoxin domain of plant laccases
    cd13875
    Location:162 → 308
    CuRO_2_LCC_plant; The second cupredoxin domain of the plant laccases
    cd13897
    Location:424 → 562
    CuRO_3_LCC_plant; The third cupredoxin domain of the plant laccases
    TIGR03389
    Location:25 → 579
    laccase; laccase, plant
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases