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LOC106762962 arabinosyltransferase RRA3 [ Vigna radiata ]

Gene ID: 106762962, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106762962
Gene description
arabinosyltransferase RRA3
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna radiata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC106762962 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Vradiata_ver6 (GCF_000741045.1) 6 NC_028356.1 (35908814..35912033)

Chromosome 6 - NC_028356.1Genomic Context describing neighboring genes Neighboring gene peroxisomal membrane protein 11A Neighboring gene probable protein phosphatase 2C 55 Neighboring gene deSI-like protein At4g17486 Neighboring gene lysophospholipid acyltransferase LPEAT1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028356.1 Chromosome 6 Reference Vradiata_ver6 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vradiata_ver6 Primary Assembly

Genomic

  1. NC_028356.1 Reference Vradiata_ver6 Primary Assembly

    Range
    35908814..35912033
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014647101.2 → XP_014502587.1  arabinosyltransferase RRA3

    UniProtKB/TrEMBL
    A0A1S3U983
    Conserved Domains (1) summary
    pfam03407
    Location:182 → 405
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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