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LOC106761087 F-box protein GID2-like [ Vigna radiata ]

Gene ID: 106761087, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106761087
Gene description
F-box protein GID2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna radiata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC106761087 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Vradiata_ver6 (GCF_000741045.1) 5 NC_028355.1 (21413801..21414760)

Chromosome 5 - NC_028355.1Genomic Context describing neighboring genes Neighboring gene WD40 repeat-containing protein HOS15 Neighboring gene MFP1 attachment factor 1 Neighboring gene protein MRG2 Neighboring gene putative receptor protein kinase ZmPK1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028355.1 Chromosome 5 Reference Vradiata_ver6 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vradiata_ver6 Primary Assembly

Genomic

  1. NC_028355.1 Reference Vradiata_ver6 Primary Assembly

    Range
    21413801..21414760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014644589.2 → XP_014500075.1  F-box protein GID2-like

    UniProtKB/TrEMBL
    A0A1S3U231
    Conserved Domains (1) summary
    pfam12937
    Location:46 → 85
    F-box-like; F-box-like
Nucleotide Protein
Heading Accession and Version

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