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LOC106759927 dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [ Vigna radiata ]

Gene ID: 106759927, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106759927
Gene description
dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna radiata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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Genomic context

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See LOC106759927 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Vradiata_ver6 (GCF_000741045.1) 5 NC_028355.1 (35603853..35610916)

Chromosome 5 - NC_028355.1Genomic Context describing neighboring genes Neighboring gene protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 Neighboring gene phosphoenolpyruvate carboxylase Neighboring gene 14-3-3-like protein D Neighboring gene AAA-ATPase At3g50940

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028355.1 Chromosome 5 Reference Vradiata_ver6 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vradiata_ver6 Primary Assembly

Genomic

  1. NC_028355.1 Reference Vradiata_ver6 Primary Assembly

    Range
    35603853..35610916
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014643314.2 → XP_014498800.1  dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A1S3TYF6
    Conserved Domains (1) summary
    pfam03901
    Location:44 → 446
    Glyco_transf_22; Alg9-like mannosyltransferase family

  2. XM_022781601.1 → XP_022637322.1  dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A3Q0F4I7
    Conserved Domains (1) summary
    cl21590
    Location:44 → 430
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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