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LOC106756347 L-ascorbate peroxidase, cytosolic [ Vigna radiata ]

Gene ID: 106756347, updated on 11-Jan-2024

Summary

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Gene symbol
LOC106756347
Gene description
L-ascorbate peroxidase, cytosolic
Gene type
protein coding
RefSeq status
MODEL
Organism
Vigna radiata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
Also known as
APX
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Genomic context

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See LOC106756347 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Vradiata_ver6 (GCF_000741045.1) 2 NC_028352.1 (5572701..5575470)

Chromosome 2 - NC_028352.1Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor RAP2-7 Neighboring gene uncharacterized LOC106756133 Neighboring gene mitogen-activated protein kinase 3 Neighboring gene uncharacterized LOC106756057

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028352.1 Chromosome 2 Reference Vradiata_ver6 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to reactive oxygen species IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-ascorbate peroxidase, cytosolic
Names
ascorbate peroxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vradiata_ver6 Primary Assembly

Genomic

  1. NC_028352.1 Reference Vradiata_ver6 Primary Assembly

    Range
    5572701..5575470
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014638736.2 → XP_014494222.1  L-ascorbate peroxidase, cytosolic

    UniProtKB/TrEMBL
    A0A1S3TKD5, B2ZFL8
    Conserved Domains (1) summary
    cd00691
    Location:5 → 250
    ascorbate_peroxidase; Ascorbate peroxidases and cytochrome C peroxidases
Nucleotide Protein
Heading Accession and Version

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